Install

The libarary is pip-installable for 64-bit Windows, OS X, or Linux. We test against python 3.6 and python 2.7.14.

pip install scanimage-tiff-reader

Examples

Read a volume from a tiff stack:

from ScanImageTiffReader import ScanImageTiffReader
vol=ScanImageTiffReader("my.tif").data();

About

The ScanImageTiffReader reads data from Tiff and BigTiff files recorded using ScanImage. It was written with performance in mind and provides access to ScanImage-specific metadata. It is also available for Matlab, Julia and C. There’s also a command line interface. This library should actually work with most tiff files, but as of now we don’t support compressed or tiled data.

The library is pip-installable for 64-bit Windows, OS X, or Linux. We test against python 3.6 and python 2.7.14.

Both ScanImage and this reader are products of Vidrio Technologies. If you have questions or need support feel free to submit an issue or contact us.